GATK¶
Description¶
- The Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute
- to analyse next-generation resequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance. Its robust architecture, powerful processing engine and high-performance computing features make it capable of taking on projects of any size.
More information¶
- Homepage: https://www.broadinstitute.org/gatk/
Compatible modules¶
This module is compatible with the following modules, one of each line is required: * Python/3.7.4-GCCcore-8.3.0 (default), Python/2.7.16-GCCcore-8.3.0
Availability¶
| Module | Manneback | Lemaitre4 |
|---|---|---|
| GATK/4.2.5.0-GCCcore-11.2.0-Java-11 | √ | |
| GATK/4.4.0.0-GCCcore-12.2.0-Java-17 | √ |